Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015808504.1_cds_XP_016495358.1_9682
CDS Infomation

[gene=LOC107814458] [db_xref=GeneID:107814458] [protein=importin-5-like isoform X2] [protein_id=XP_016495358.1] [location=join(51071..52309,52559..52762,53228..53332,53441..53506,54123..54197,54278..54429,54965..55100,55199..55268,55356..55483,55564..55620,56251..56436,56549..56641,56731..56816,56889..56955,57042..57108,57213..57349,57793..57884,64002..64068,64206..64481)] [gbkey=CDS]
Sequence

ATGGATATTGTGTTGACTCAGTTCCATAAGGTCCAGATGGAGGCCATTTTGGGGCCCGAA
TCGGAGCCATTTGAAACCTTCATTTCCAATCACATGGAAAGCTCCGAGGAAACAGTTTCT
GAGGCTAAGTCAATGTTCAACATGTTGAAGCACAAGGATCCTAACTCCCTTGCTCTTAAG
CTTGCTCTTGGCTCTTCCTATGACATTTACTCCCGTGAAAAGTGTGCTGTCCTCTTAAAA
CAGTTGCTTACTGATGAGGATGACTTGTGCACTTGGAGTAATCTAAGTCTGTCAACTCAA
TTCACTGTCAAATCAATCCTCCTTAATCGAATGAGGGGTGAAGAATCAAGATTCATCATC
CAAGAGCTCCGTGACACTGTTTCAAAGCTGGCTGCCTCACTTCTTCCAGATAACAATTGG
CCTGAATTGTTTCCATTCTTGTACCAATGCCTCACTTCCACTTCAAACAACTACTTAAAG
AGGTCAGCTTTTATGTTATTTGCGCAACTAGCCGCGGACATAGGTGAAACAATTGTCCCT
TGTGTAAAAGATATGCACTCACTATTCTTAAATACACTGAATGATTATACCCTCGATCTA
GATGTGAGGATCGAGGCCATGAGTGCTGTGTTCAACTTCATTAAGTGCGTATTGAGTTCA
AATGAAAAGGAGTTGTTTCAGGATTTATTGCCAGGTATGATGAGGACGTTGACTAATGCA
TTGAGCAACAATGAGGAGAAGGCTGCAGCACATGAACCTCTGAAAGTTTTTATTAAGTTG
GCGAAGAATGAGCCTAGGTTCTTCAGGAGGCAGCTAGTGGATGTGGTGGATGTCATGTTT
GAGATAGCAGAATCTGAGAGTTTAGATCAAAGAGCGAGGCACTTTGCGGTTCTATTCTTT
ATAACTTTGATCGAGGCGAAGGAGAAGGCCGCAGGCATGCTGAAGAGATTGCCTTTGTTT
ATTAGCAGATGTTTTGAAATGTTATTAAAGTTATTACTAGATATTAAAGATGACCCTGCT
TGGAATAGTGGCGAGAACGTGCATGATTTTGCAGGGATATTGATCTGTGACCGCAAAATT
GGCGAGGAGGGTTTACGCCGGTTTTCTCTTGCATTACGAGGTGAGTTTACTACTCATATT
GCAATAGAGCAGTTGTATGCTTACTTGGCTGCCCCGGAGTGGGAGAAGCGCCATGCAGCT
CTCATTGCACTTGCTCAGATTGCTGAAGGTTTCTCAGAGGTGATGATAAAGAATCTGGAG
CAAATGATGAATATGGTTTTAAACTGTTTCCAAGATCCTCATCCTCGAGTCAGGTGGGCT
GCTTGCTGGACAATTTCTCAGTTGTTGATTGACTTCTCTCCGCTTGTGCAAGAACAATAC
CATAACCAAATATTCCTTGCATTAGCTGCAGCCATGGATGATTTTCAAAATCCTCGAGTG
CAGGCATTTGCCACGGCAGCTCTCTGCAACTTCTGTGTGCCTGACGAGCCAGAAACTTTG
ATACCTTACCTAGATGGGATAGTTAACAAACTGCTTGTACTTCTACAGAATAACAAACAA
ATGGTCCAAGAACAAGCATTAACTGCATTGTCTTGTATTGCTCAATCTGTTAAGGTCATG
GAAGTGCTTATGTCATTACAAGGATTACAAGCGAAGGCGGATGATCCTACTACTAAGTAC
ATGCTAGGCGCATGTACTAGAATTTGCAAGTGCATGGGACAGGATTTTCTTCCTTATATG
AGTGCAATCATGCCATTTTTAATTAAATGTGCTGAACTTGAACCTGTTATGACCATATCT
GCGAAGTTGGATTATGAATATTACGAGTTAGATGATAATAGTATAGAGAAAATCAAGCTT
GGAGATAAAACGATGTTCAAGAAAGGAAATGTCCCAGAGGAGAAAGTTGTAGCCTGTGAT
ATGCTATGCTGCTATACTGATATATTGCAGGAAGACTTCTACCCATGGATTTCCCAGGTT
GTTTCAATCTTTGTTCCGCTTCTGGAGTTCTATATTCACGATCCTGTCAGGAGATCTGCT
GTTGTAGCAATGCCCATCCTGTTGCGTTCTGCTAAACTGGCTTTTGAGAAAGGGATTGCT
CAAGGTGAAAGTGAGGCATATTTCACGAAGTTATCAGACTATATAATACTGGCTTTGGCA
GAAGCTATGCATAAGGAGCATGTGACAGAAATCTGTGCAATCATGTTGGGAGAATTGAAT
TATTGCCTGCAGATTTGTAGACCACTTCCCACTGAAGGTCAGGTTCGTAGCATTGTTAAT
GAGATAAAGCATGTAATTACAGAAAGCTCAAGTAGAAAACAAGCACTCACAGAGAGAGAG
AAACCGGATGACTTTGATGCTGAGGAAGCAGAATTGTTAAGGGGGGAAAGAGAGCAAGAA
GAAGAAATTTTTGACAATGTTGGTGAAATATTGATAACATTGATCAAAGCTTTCAAGGCT
GCTTTCTTGCCTTTCCTTGAGGAGTTGTCACCATATTTGTTACCTATGTGGGCCAAGGAG
ACAACAACTGTTGAGAGATGTACATCTATTTGTATCTTCGATGCTCTGGTGGAGGTGTGC
CCTGAAGCAGCTCTAAAGTACTATGATGTTTGTCTTCCATTAATTTTTGACGCAAGCAAC
GACGAAAATCCAGCTGTTAGACAGGCTGCTTTTTATGGACTTGGGCTGTGGGCGGCATTT
GGTCGTTCTTCTTTCAAACCTTTTGTTGTAGAGGCTCTGTCAAGGATCAAAGTAGTGATA
ATGCATATGAATGCTCTTGAATCTGAGAATGAAAAAGCATATGATAATGCTGTTTCTGCA
CTTAGTAAGATATGTCAGTTTCATGATGAAAGTATTGACTTAGCCCAGGTTATTCCAGTT
TGGTTGAATTGCCTGCCTATAAAAGCTGACTTGGACGAAGCCAAAGATGTTCATGAACAG
TTGTGTTCAATGGTCGAAAGGTCAGACAGAGAAGTTTTAGGTCCCAACTATCAGTACCTT
CCAAAAGTTGTTTCAATTTTTGCAGAGGTTCTACGTGCCGGAGAGGATCTTGCTACTGAA
GGAACTACAAAACGCATGATTAATCTTTTGCGGCATTTTCAGGAAACAATACCTACAGCC
ACCTGGGCATCAACATGGTCATTGCTGTTGCCTCAGCAAGAGATGGAGGTGGAATCCGTT
TTATCAGCGCCTAAGGAAGATGTTAACATTAACCCATGCAATGAAACTTATAGTCTTGTG
CTGTGGGAACCAAACATTTTGATTGGCACAGTGTGGTCTTATTGGCCTGTCCAGGTGCGA
TAA

Peptide Sequence

PEP ID

XP_016495358.1
PEP Infomation

PREDICTED: importin-5-like isoform X2 [Nicotiana tabacum]
Sequence

MDIVLTQFHKVQMEAILGPESEPFETFISNHMESSEETVSEAKSMFNMLKHKDPNSLALK
LALGSSYDIYSREKCAVLLKQLLTDEDDLCTWSNLSLSTQFTVKSILLNRMRGEESRFII
QELRDTVSKLAASLLPDNNWPELFPFLYQCLTSTSNNYLKRSAFMLFAQLAADIGETIVP
CVKDMHSLFLNTLNDYTLDLDVRIEAMSAVFNFIKCVLSSNEKELFQDLLPGMMRTLTNA
LSNNEEKAAAHEPLKVFIKLAKNEPRFFRRQLVDVVDVMFEIAESESLDQRARHFAVLFF
ITLIEAKEKAAGMLKRLPLFISRCFEMLLKLLLDIKDDPAWNSGENVHDFAGILICDRKI
GEEGLRRFSLALRGEFTTHIAIEQLYAYLAAPEWEKRHAALIALAQIAEGFSEVMIKNLE
QMMNMVLNCFQDPHPRVRWAACWTISQLLIDFSPLVQEQYHNQIFLALAAAMDDFQNPRV
QAFATAALCNFCVPDEPETLIPYLDGIVNKLLVLLQNNKQMVQEQALTALSCIAQSVKVM
EVLMSLQGLQAKADDPTTKYMLGACTRICKCMGQDFLPYMSAIMPFLIKCAELEPVMTIS
AKLDYEYYELDDNSIEKIKLGDKTMFKKGNVPEEKVVACDMLCCYTDILQEDFYPWISQV
VSIFVPLLEFYIHDPVRRSAVVAMPILLRSAKLAFEKGIAQGESEAYFTKLSDYIILALA
EAMHKEHVTEICAIMLGELNYCLQICRPLPTEGQVRSIVNEIKHVITESSSRKQALTERE
KPDDFDAEEAELLRGEREQEEEIFDNVGEILITLIKAFKAAFLPFLEELSPYLLPMWAKE
TTTVERCTSICIFDALVEVCPEAALKYYDVCLPLIFDASNDENPAVRQAAFYGLGLWAAF
GRSSFKPFVVEALSRIKVVIMHMNALESENEKAYDNAVSALSKICQFHDESIDLAQVIPV
WLNCLPIKADLDEAKDVHEQLCSMVERSDREVLGPNYQYLPKVVSIFAEVLRAGEDLATE
GTTKRMINLLRHFQETIPTATWASTWSLLLPQQEMEVESVLSAPKEDVNINPCNETYSLV
LWEPNILIGTVWSYWPVQVR

Transcript Sequence

Gene sequence data has not been registered.